Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS34925 | Not Available | + | 7582454 - 7583047 | 21214.5 |
| duf2203 family protein | AJAP_RS34930 | Not Available | + | 7583069 - 7584064 | 35225.9 |
| esterase/lipase family protein | AJAP_RS34935 | Not Available | - | 7584068 - 7584922 | 29593.2 |
| lrp/asnc family transcriptional regulator | AJAP_RS34940 | Not Available | - | 7585031 - 7585465 | 15954.6 |
| nad-dependent epimerase/dehydratase family protein | AJAP_RS34945 | Not Available | + | 7585581 - 7586420 | 30508.8 |
| aldo/keto reductase | AJAP_RS34950 | Not Available | + | 7586426 - 7587250 | 28852.5 |
| lyse/argo family amino acid transporter | AJAP_RS34955 | Not Available | - | 7587251 - 7587865 | 20734.9 |
| lysr family transcriptional regulator argp | AJAP_RS34960 | Not Available | + | 7587932 - 7588810 | 31600.9 |
| hhh-gpd-type base excision dna repair protein | AJAP_RS34965 | Not Available | + | 7588906 - 7589493 | 21375.6 |
| fad-binding oxidoreductase | AJAP_RS34970 | Not Available | - | 7589501 - 7591189 | 60573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.