Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS34875 | Not Available | - | 7575533 - 7576036 | 18277.0 |
| cupin domain-containing protein | AJAP_RS34880 | Not Available | + | 7576102 - 7576602 | 17859.3 |
| hypothetical protein | AJAP_RS44180 | Not Available | - | 7576596 - 7577453 | 32131.8 |
| duf86 domain-containing protein | AJAP_RS34890 | Not Available | - | 7577510 - 7577848 | 12587.1 |
| nucleotidyltransferase family protein | AJAP_RS34895 | Not Available | - | 7577838 - 7578146 | 11757.0 |
| exodeoxyribonuclease iii | AJAP_RS34900 | Not Available | - | 7578238 - 7579044 | 29800.1 |
| mbl fold metallo-hydrolase | AJAP_RS34905 | Not Available | + | 7579090 - 7579833 | 26562.6 |
| hypothetical protein | AJAP_RS34910 | Not Available | - | 7579894 - 7580199 | 10365.5 |
| nadp-dependent isocitrate dehydrogenase | AJAP_RS34915 | Not Available | - | 7580390 - 7581613 | 45490.3 |
| hypothetical protein | AJAP_RS34920 | Not Available | + | 7581861 - 7582370 | 17516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.