Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m14 family zinc carboxypeptidase | AJAP_RS34825 | Not Available | - | 7564690 - 7565919 | 45548.9 |
| hypothetical protein | AJAP_RS34830 | Not Available | + | 7566081 - 7566998 | 33911.6 |
| s8 family peptidase | AJAP_RS34835 | Not Available | - | 7567178 - 7568590 | 48464.6 |
| sco4848 family membrane protein | AJAP_RS34840 | Not Available | - | 7568669 - 7568923 | 9260.28 |
| d-alanyl-d-alanine carboxypeptidase family protein | AJAP_RS34845 | Not Available | + | 7568967 - 7570205 | 42902.5 |
| yhjd/yihy/brkb family envelope integrity protein | AJAP_RS34850 | Not Available | - | 7570441 - 7571463 | 36010.6 |
| tryptophan--trna ligase | AJAP_RS34855 | Not Available | - | 7571505 - 7572524 | 37597.6 |
| s1 family peptidase | AJAP_RS34860 | Not Available | + | 7572688 - 7573434 | 24908.4 |
| hypothetical protein | AJAP_RS34865 | Not Available | - | 7573858 - 7574187 | 10798.4 |
| glycoside hydrolase family 19 protein | AJAP_RS34870 | Not Available | + | 7574589 - 7575476 | 31388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.