Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | AJAP_RS34775 | Not Available | - | 7553977 - 7554366 | 13261.0 |
| abc transporter permease | AJAP_RS34780 | Not Available | - | 7554368 - 7555642 | 44453.8 |
| abc transporter permease | AJAP_RS34785 | Not Available | - | 7555639 - 7556736 | 37898.1 |
| abc transporter atp-binding protein | AJAP_RS34790 | Not Available | - | 7556733 - 7558313 | 56401.8 |
| bmp family protein | AJAP_RS34795 | Not Available | - | 7558395 - 7559534 | 38407.0 |
| succinate dehydrogenase, cytochrome b556 subunit | AJAP_RS34800 | Not Available | + | 7560080 - 7560523 | 16461.3 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | AJAP_RS34805 | Not Available | + | 7560526 - 7560945 | 15887.7 |
| succinate dehydrogenase flavoprotein subunit | AJAP_RS34810 | Not Available | + | 7560977 - 7562731 | 64359.5 |
| succinate dehydrogenase iron-sulfur subunit | AJAP_RS34815 | Not Available | + | 7562731 - 7563501 | 29007.5 |
| hypothetical protein | AJAP_RS34820 | Not Available | + | 7563659 - 7564627 | 36153.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.