Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AJAP_RS34625 | Not Available | - | 7524425 - 7525408 | 35307.9 |
| merr family transcriptional regulator | AJAP_RS34630 | Not Available | - | 7525405 - 7525806 | 14986.1 |
| tetr/acrr family transcriptional regulator | AJAP_RS34635 | Not Available | + | 7525891 - 7526487 | 21272.5 |
| hypothetical protein | AJAP_RS34640 | Not Available | - | 7526637 - 7527917 | 44977.4 |
| rna polymerase sigma factor | AJAP_RS34645 | Not Available | - | 7527914 - 7528507 | 21827.8 |
| uracil phosphoribosyltransferase | AJAP_RS34650 | Not Available | - | 7528588 - 7529211 | 22306.0 |
| protein-tyrosine phosphatase family protein | AJAP_RS34655 | Not Available | - | 7529230 - 7529673 | 16454.5 |
| duf1707 domain-containing protein | AJAP_RS34660 | Not Available | + | 7529779 - 7530390 | 21499.7 |
| serine hydrolase domain-containing protein | AJAP_RS34665 | Not Available | + | 7530413 - 7531573 | 41600.9 |
| deoxyribose-phosphate aldolase | AJAP_RS34670 | Not Available | + | 7531593 - 7532567 | 34450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.