Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase/oxidase | AJAP_RS34475 | Not Available | - | 7492670 - 7494409 | 63292.3 |
| mip/aquaporin family protein | AJAP_RS34480 | Not Available | + | 7494644 - 7495399 | 26068.8 |
| glycerol kinase glpk | AJAP_RS34485 | Not Available | + | 7495414 - 7496925 | 54576.4 |
| hypothetical protein | AJAP_RS44955 | Not Available | + | 7497044 - 7497520 | 15656.8 |
| hypothetical protein | AJAP_RS34495 | Not Available | - | 7497602 - 7498144 | 18560.3 |
| class f sortase | AJAP_RS34500 | Not Available | - | 7498150 - 7498803 | 22895.6 |
| hypothetical protein | AJAP_RS34505 | Not Available | - | 7498956 - 7499396 | 14537.1 |
| nad(p)h-quinone dehydrogenase | AJAP_RS34510 | Not Available | - | 7499501 - 7500904 | 48944.9 |
| gamma-glutamylcyclotransferase | AJAP_RS34515 | Not Available | + | 7501032 - 7501484 | 16159.1 |
| duf559 domain-containing protein | AJAP_RS34520 | Not Available | - | 7501547 - 7502389 | 30682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.