Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | AJAP_RS34375 | Not Available | + | 7473341 - 7474159 | 30344.8 |
| sensor histidine kinase | AJAP_RS34380 | Not Available | + | 7474228 - 7475379 | 40050.8 |
| response regulator | AJAP_RS34385 | Not Available | + | 7475376 - 7476038 | 23506.5 |
| acyl-coa carboxylase subunit beta | AJAP_RS34390 | Not Available | + | 7476509 - 7478146 | 58411.2 |
| acyl-coa carboxylase subunit epsilon | AJAP_RS34395 | Not Available | + | 7478143 - 7478361 | 7471.88 |
| helix-turn-helix domain-containing protein | AJAP_RS34400 | Not Available | + | 7478423 - 7479256 | 31079.2 |
| duf397 domain-containing protein | AJAP_RS34405 | Not Available | + | 7479454 - 7479660 | 7687.07 |
| hypothetical protein | AJAP_RS34410 | Not Available | + | 7479657 - 7479977 | 12219.4 |
| padr family transcriptional regulator | AJAP_RS34415 | Not Available | + | 7480078 - 7480704 | 23959.7 |
| dha2 family efflux mfs transporter permease subunit | AJAP_RS34420 | Not Available | + | 7480685 - 7482295 | 55363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.