Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | AJAP_RS34325 | Not Available | + | 7465922 - 7466317 | 14475.1 |
| thioredoxin | AJAP_RS34330 | Not Available | + | 7466318 - 7466653 | 12314.0 |
| lyse/argo family amino acid transporter | AJAP_RS34335 | Not Available | + | 7467042 - 7467665 | 20983.3 |
| voc family protein | AJAP_RS34340 | Not Available | + | 7467712 - 7468137 | 15893.3 |
| prolyl oligopeptidase family serine peptidase | AJAP_RS34345 | Not Available | - | 7468134 - 7469894 | 63909.4 |
| srpbcc domain-containing protein | AJAP_RS34350 | Not Available | - | 7469899 - 7470339 | 15867.5 |
| arsr/smtb family transcription factor | AJAP_RS34355 | Not Available | - | 7470336 - 7470653 | 11672.0 |
| lysoplasmalogenase family protein | AJAP_RS34360 | Not Available | - | 7470713 - 7471411 | 24072.5 |
| glxa family transcriptional regulator | AJAP_RS34365 | Not Available | - | 7471464 - 7472474 | 36380.4 |
| nad(p)h-dependent oxidoreductase | AJAP_RS34370 | Not Available | + | 7472518 - 7473288 | 28074.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.