Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | AJAP_RS34125 | Not Available | + | 7426472 - 7427383 | 32344.8 |
| glycosyltransferase | AJAP_RS34130 | Not Available | + | 7427416 - 7429929 | 91361.4 |
| glycosyltransferase family 4 protein | AJAP_RS34135 | Not Available | + | 7429922 - 7431010 | 39124.2 |
| dtdp-4-dehydrorhamnose reductase | AJAP_RS34140 | Not Available | - | 7431070 - 7431960 | 30884.2 |
| dtdp-glucose 4,6-dehydratase | AJAP_RS34145 | Not Available | - | 7431947 - 7432930 | 35855.1 |
| lcp family protein | AJAP_RS34150 | Not Available | + | 7433082 - 7434614 | 54045.3 |
| lcp family protein | AJAP_RS34155 | Not Available | + | 7434703 - 7436028 | 47009.1 |
| tigr03089 family protein | AJAP_RS34160 | Not Available | + | 7436039 - 7436746 | 24290.7 |
| doxx family protein | AJAP_RS34165 | Not Available | - | 7436811 - 7437236 | 14768.4 |
| hypothetical protein | AJAP_RS34170 | Not Available | + | 7437372 - 7437824 | 16758.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.