Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AJAP_RS33975 | Not Available | + | 7397665 - 7398987 | 48382.8 |
| m4 family metallopeptidase | AJAP_RS33980 | Not Available | + | 7399265 - 7401532 | 77330.3 |
| m28 family peptidase | AJAP_RS33985 | Not Available | + | 7401629 - 7403215 | 54392.8 |
| chitinase | AJAP_RS33990 | Not Available | + | 7403419 - 7404474 | 36996.4 |
| helix-turn-helix domain-containing protein | AJAP_RS33995 | Not Available | + | 7404658 - 7405911 | 44598.9 |
| aminoglycoside phosphotransferase family protein | AJAP_RS34000 | Not Available | + | 7405908 - 7406795 | 31490.5 |
| succinyl-diaminopimelate desuccinylase | AJAP_RS34005 | Not Available | - | 7406959 - 7408035 | 38095.4 |
| hypothetical protein | AJAP_RS34010 | Not Available | + | 7408078 - 7408473 | 13548.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AJAP_RS34015 | Not Available | + | 7408502 - 7409488 | 33490.8 |
| chad domain-containing protein | AJAP_RS34020 | Not Available | + | 7409606 - 7410577 | 35236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.