Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | AJAP_RS33880 | Not Available | + | 7379838 - 7380449 | 21716.6 |
| m17 family metallopeptidase | AJAP_RS33885 | Not Available | - | 7380458 - 7381921 | 50738.8 |
| duf3117 domain-containing protein | AJAP_RS43265 | Not Available | - | 7382012 - 7382179 | 5691.96 |
| enoyl-coa hydratase/isomerase family protein | AJAP_RS33890 | Not Available | + | 7382376 - 7383170 | 27046.4 |
| dna-3-methyladenine glycosylase i | AJAP_RS33895 | Not Available | - | 7383220 - 7383792 | 21092.0 |
| srpbcc family protein | AJAP_RS33900 | Not Available | - | 7383785 - 7384234 | 16242.7 |
| diviva domain-containing protein | AJAP_RS33905 | Not Available | - | 7384231 - 7384533 | 11038.6 |
| permease prefix domain 1-containing protein | AJAP_RS33910 | Not Available | - | 7384530 - 7385204 | 24901.7 |
| permease prefix domain 1-containing protein | AJAP_RS33915 | Not Available | - | 7385201 - 7385851 | 22814.5 |
| permease prefix domain 1-containing protein | AJAP_RS33920 | Not Available | - | 7385848 - 7386513 | 23854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.