Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1003 domain-containing protein | AJAP_RS33830 | Not Available | + | 7370806 - 7371315 | 19418.3 |
| mrp/nbp35 family atp-binding protein | AJAP_RS33835 | Not Available | + | 7371325 - 7372470 | 39939.6 |
| sec-independent protein translocase protein tatb | AJAP_RS33840 | Not Available | - | 7372557 - 7372976 | 14988.8 |
| trypsin-like peptidase domain-containing protein | AJAP_RS33845 | Not Available | - | 7373032 - 7374573 | 51709.0 |
| hypothetical protein | AJAP_RS33850 | Not Available | + | 7374734 - 7375369 | 22195.8 |
| anti-sigma factor family protein | AJAP_RS33855 | Not Available | - | 7375379 - 7376074 | 22957.3 |
| rna polymerase sigma factor sige | AJAP_RS33860 | Not Available | - | 7376071 - 7376691 | 23256.3 |
| o-methyltransferase | AJAP_RS33865 | Not Available | + | 7376870 - 7377520 | 22349.8 |
| mfs transporter | AJAP_RS33870 | Not Available | - | 7377543 - 7378778 | 41320.0 |
| lysr family transcriptional regulator | AJAP_RS33875 | Not Available | + | 7378884 - 7379768 | 31438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.