Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AJAP_RS33780 | Not Available | - | 7361661 - 7362611 | 34397.7 |
| abc transporter substrate-binding protein | AJAP_RS33785 | Not Available | - | 7362608 - 7363930 | 47607.3 |
| general stress protein | AJAP_RS33790 | Not Available | - | 7364156 - 7364671 | 17907.8 |
| acyl-coa dehydrogenase family protein | AJAP_RS33795 | Not Available | - | 7364732 - 7365928 | 43371.2 |
| duf4190 domain-containing protein | AJAP_RS33800 | Not Available | + | 7366087 - 7366404 | 10950.7 |
| duf4190 domain-containing protein | AJAP_RS33805 | Not Available | + | 7366436 - 7366825 | 13875.1 |
| duf4190 domain-containing protein | AJAP_RS33810 | Not Available | + | 7366878 - 7367522 | 21853.9 |
| slipin family protein | AJAP_RS33815 | Not Available | - | 7367631 - 7368470 | 30374.8 |
| aminoglycoside phosphotransferase family protein | AJAP_RS33820 | Not Available | + | 7368559 - 7369470 | 33381.3 |
| magnesium transporter mgte n-terminal domain-containing protein | AJAP_RS33825 | Not Available | + | 7369515 - 7370813 | 47250.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.