Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | AJAP_RS33635 | Not Available | + | 7334978 - 7335514 | 18632.3 |
| alpha/beta fold hydrolase | AJAP_RS33640 | Not Available | - | 7335721 - 7336644 | 33011.8 |
| aurf n-oxygenase family protein | AJAP_RS33645 | Not Available | - | 7336641 - 7337549 | 34693.0 |
| tetr/acrr family transcriptional regulator | AJAP_RS33650 | Not Available | + | 7337600 - 7338367 | 28604.3 |
| duf4873 domain-containing protein | AJAP_RS33655 | Not Available | + | 7338364 - 7338690 | 11887.6 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | AJAP_RS33660 | Not Available | - | 7338803 - 7340083 | 45591.5 |
| duf3107 domain-containing protein | AJAP_RS33665 | Not Available | - | 7340198 - 7340428 | 8274.86 |
| ferritin-like fold-containing protein | AJAP_RS33670 | Not Available | - | 7340489 - 7341142 | 23189.7 |
| dead/deah box helicase | AJAP_RS33675 | Not Available | + | 7341606 - 7343198 | 57220.3 |
| hypothetical protein | AJAP_RS33680 | Not Available | + | 7343234 - 7344628 | 48872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.