Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3224 domain-containing protein | AJAP_RS33535 | Not Available | + | 7310350 - 7310745 | 13667.7 |
| dna glycosylase alkz-like family protein | AJAP_RS33540 | Not Available | + | 7310755 - 7311873 | 40084.1 |
| kelch repeat-containing protein | AJAP_RS33545 | Not Available | + | 7311967 - 7313148 | 40661.0 |
| uroporphyrinogen-iii synthase | AJAP_RS33550 | Not Available | - | 7313211 - 7314314 | 38434.5 |
| nitrite reductase small subunit nird | AJAP_RS33555 | Not Available | - | 7314311 - 7314658 | 11853.1 |
| nitrite reductase large subunit nirb | AJAP_RS33560 | Not Available | - | 7314655 - 7317159 | 88666.2 |
| nitrate/nitrite transporter | AJAP_RS33565 | Not Available | - | 7317159 - 7318517 | 48189.4 |
| fad-dependent oxidoreductase | AJAP_RS33570 | Not Available | - | 7318547 - 7319974 | 49470.2 |
| molybdopterin oxidoreductase family protein | AJAP_RS33575 | Not Available | - | 7319971 - 7322040 | 72989.9 |
| padr family transcriptional regulator | AJAP_RS33580 | Not Available | + | 7322555 - 7323079 | 19513.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.