Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS33485 | Not Available | - | 7297080 - 7297484 | 13446.2 |
| potassium channel family protein | AJAP_RS33490 | Not Available | - | 7297655 - 7298731 | 38657.0 |
| membrane protein | AJAP_RS33495 | Not Available | + | 7298820 - 7299206 | 13734.9 |
| atp-dependent helicase | AJAP_RS33500 | Not Available | - | 7299203 - 7302460 | 118800.0 |
| atp-dependent dna helicase | AJAP_RS33505 | Not Available | - | 7302457 - 7305672 | 115002.0 |
| mgmt family protein | AJAP_RS33510 | Not Available | + | 7305727 - 7306050 | 11702.7 |
| siderophore-interacting protein | AJAP_RS33515 | Not Available | + | 7306065 - 7306895 | 30263.8 |
| sensor histidine kinase | AJAP_RS33520 | Not Available | - | 7307175 - 7308464 | 46026.1 |
| uroporphyrinogen-iii synthase | AJAP_RS33525 | Not Available | - | 7308519 - 7309328 | 28183.0 |
| helix-turn-helix transcriptional regulator | AJAP_RS33530 | Not Available | - | 7309321 - 7310289 | 36192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.