Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AJAP_RS33385 | Not Available | - | 7272479 - 7273468 | 35972.0 |
| extracellular solute-binding protein | AJAP_RS33390 | Not Available | - | 7273473 - 7274855 | 49706.8 |
| rok family transcriptional regulator | AJAP_RS33395 | Not Available | - | 7274866 - 7276116 | 42870.2 |
| nad(+) diphosphatase | AJAP_RS33400 | Not Available | - | 7276903 - 7277916 | 36820.3 |
| m16 family metallopeptidase | AJAP_RS33405 | Not Available | - | 7277916 - 7279292 | 48402.5 |
| m16 family metallopeptidase | AJAP_RS33410 | Not Available | - | 7279289 - 7280608 | 47880.1 |
| duf2207 family protein | AJAP_RS33415 | Not Available | - | 7280630 - 7282219 | 56569.5 |
| duf2207 domain-containing protein | AJAP_RS33420 | Not Available | - | 7282251 - 7284020 | 61853.0 |
| neutral zinc metallopeptidase | AJAP_RS33425 | Not Available | + | 7284288 - 7285550 | 44416.7 |
| rdd family protein | AJAP_RS33430 | Not Available | - | 7285628 - 7286509 | 31219.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.