Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding negative transcriptional regulator | AJAP_RS33335 | Not Available | + | 7263589 - 7264209 | 22831.0 |
| cobalamin biosynthesis protein | AJAP_RS33340 | Not Available | - | 7264754 - 7265707 | 32402.3 |
| fadr/gntr family transcriptional regulator | AJAP_RS33345 | Not Available | - | 7265746 - 7266441 | 25428.3 |
| gluconokinase | AJAP_RS33350 | Not Available | + | 7266545 - 7267036 | 17955.4 |
| gluconate:h+ symporter | AJAP_RS33355 | Not Available | + | 7267036 - 7268403 | 46068.3 |
| arsr/smtb family transcription factor | AJAP_RS33360 | Not Available | + | 7268447 - 7268773 | 12618.2 |
| srpbcc family protein | AJAP_RS33365 | Not Available | + | 7268770 - 7269279 | 18695.9 |
| n-acetylglucosamine kinase | AJAP_RS33370 | Not Available | - | 7269338 - 7270342 | 34329.9 |
| 6-phospho-beta-glucosidase | AJAP_RS33375 | Not Available | - | 7270327 - 7271592 | 45732.4 |
| carbohydrate abc transporter permease | AJAP_RS33380 | Not Available | - | 7271589 - 7272482 | 33564.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.