Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| brex system atp-binding domain-containing protein | AJAP_RS33285 | Not Available | + | 7252565 - 7255390 | 101552.0 |
| dimethylsulfone monooxygenase sfng | AJAP_RS33290 | Not Available | + | 7255424 - 7256515 | 40658.6 |
| hypothetical protein | AJAP_RS33295 | Not Available | - | 7256562 - 7258298 | 61567.9 |
| bifunctional rnase h/acid phosphatase | AJAP_RS33300 | Not Available | - | 7258411 - 7259520 | 39301.8 |
| zinc ribbon domain-containing protein | AJAP_RS33305 | Not Available | - | 7259517 - 7260254 | 27638.8 |
| nif3-like dinuclear metal center hexameric protein | AJAP_RS33310 | Not Available | - | 7260272 - 7261093 | 28573.6 |
| chorismate mutase | AJAP_RS33315 | Not Available | + | 7261125 - 7261679 | 19911.0 |
| hypothetical protein | AJAP_RS33320 | Not Available | - | 7261777 - 7262097 | 11879.4 |
| low molecular weight protein-tyrosine-phosphatase | AJAP_RS33325 | Not Available | + | 7262228 - 7262689 | 16520.6 |
| surf1 family protein | AJAP_RS33330 | Not Available | + | 7262713 - 7263534 | 30335.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.