Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional lysylphosphatidylglycerol synthetase/lysine--trna ligase lysx | AJAP_RS33095 | Not Available | - | 7199094 - 7202411 | 121388.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | AJAP_RS33100 | Not Available | + | 7202656 - 7203531 | 31095.2 |
| right-handed parallel beta-helix repeat-containing protein | AJAP_RS33105 | Not Available | + | 7203769 - 7204743 | 33607.2 |
| prolyl aminopeptidase | AJAP_RS33110 | Not Available | + | 7204833 - 7205792 | 35515.0 |
| hypothetical protein | AJAP_RS43850 | Not Available | - | 7205893 - 7206444 | 20090.9 |
| polymorphic toxin-type hint domain-containing protein | AJAP_RS33115 | Not Available | - | 7206441 - 7215938 | 340610.0 |
| pqq-dependent sugar dehydrogenase | AJAP_RS33120 | Not Available | + | 7216328 - 7219369 | 108070.0 |
| abc transporter permease | AJAP_RS33125 | Not Available | - | 7219415 - 7220221 | 28614.5 |
| abc transporter permease | AJAP_RS33130 | Not Available | - | 7220231 - 7221115 | 31948.7 |
| abc transporter substrate-binding protein | AJAP_RS33135 | Not Available | - | 7221191 - 7222396 | 43194.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.