Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | AJAP_RS32995 | Not Available | - | 7172121 - 7172555 | 16237.6 |
| bifunctional | AJAP_RS33000 | Not Available | - | 7172686 - 7175658 | 107081.0 |
| inorganic phosphate transporter | AJAP_RS33005 | Not Available | - | 7175770 - 7176888 | 37754.4 |
| type 1 glutamine amidotransferase | AJAP_RS33010 | Not Available | - | 7176994 - 7177749 | 26960.3 |
| rhodanese-like domain-containing protein | AJAP_RS33015 | Not Available | - | 7177839 - 7178291 | 15941.0 |
| lrp/asnc family transcriptional regulator | AJAP_RS33020 | Not Available | + | 7178399 - 7178845 | 16643.9 |
| 5s ribosomal rna | Not Available | Not Available | + | 7178969 - 7179085 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 7179166 - 7182301 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 7182623 - 7184139 | Not Available |
| amidase | AJAP_RS33040 | Not Available | - | 7184535 - 7186097 | 54462.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.