Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | AJAP_RS42620 | Not Available | + | 7151133 - 7152779 | 58955.9 |
| Trna-met | Not Available | Not Available | + | 7152739 - 7152812 | Not Available |
| upf0182 family protein | AJAP_RS32905 | Not Available | - | 7152880 - 7155873 | 107622.0 |
| ppa1309 family protein | AJAP_RS32910 | Not Available | + | 7156030 - 7156578 | 19063.7 |
| pdz domain-containing protein | AJAP_RS32915 | Not Available | - | 7156710 - 7157714 | 34810.8 |
| zinc-dependent metalloprotease | AJAP_RS32920 | Not Available | + | 7157918 - 7159267 | 47727.1 |
| m48 family metallopeptidase | AJAP_RS32925 | Not Available | - | 7159274 - 7159837 | 21296.6 |
| hypothetical protein | AJAP_RS32930 | Not Available | + | 7160001 - 7161035 | 36493.7 |
| abc1 kinase family protein | AJAP_RS32935 | Not Available | + | 7161113 - 7162453 | 49001.5 |
| hypothetical protein | AJAP_RS32940 | Not Available | + | 7162596 - 7163507 | 32907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.