Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | AJAP_RS32795 | Not Available | - | 7134644 - 7136170 | 53485.3 |
| iclr family transcriptional regulator | AJAP_RS32800 | Not Available | + | 7136543 - 7137328 | 27995.9 |
| hypothetical protein | AJAP_RS43845 | Not Available | - | 7137316 - 7137531 | 7754.16 |
| alpha/beta fold hydrolase | AJAP_RS32805 | Not Available | - | 7137667 - 7138404 | 26524.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | AJAP_RS32810 | Not Available | - | 7138426 - 7139250 | 29451.0 |
| type iv toxin-antitoxin system abiei family antitoxin | AJAP_RS32815 | Not Available | - | 7139219 - 7140202 | 36081.1 |
| Tmrna,resume consensus sequence (at 88): aataagcgccgagcctaa | Not Available | Not Available | + | 7140327 - 7140698 | Not Available |
| sensor domain-containing protein | AJAP_RS32820 | Not Available | + | 7140854 - 7141531 | 24571.3 |
| sensor histidine kinase | AJAP_RS32825 | Not Available | + | 7141528 - 7142667 | 41338.3 |
| response regulator transcription factor | AJAP_RS32830 | Not Available | + | 7142720 - 7143361 | 22482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.