Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS32645 | Not Available | - | 7101269 - 7102162 | 32916.5 |
| type iia dna topoisomerase subunit b | AJAP_RS32650 | Not Available | + | 7102441 - 7104492 | 74530.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | AJAP_RS32655 | Not Available | + | 7104522 - 7107008 | 89713.5 |
| acyl-coa dehydrogenase family protein | AJAP_RS32660 | Not Available | - | 7107233 - 7108444 | 43589.8 |
| sdr family oxidoreductase | AJAP_RS32665 | Not Available | - | 7108441 - 7109310 | 29474.7 |
| maoc/paaz c-terminal domain-containing protein | AJAP_RS32670 | Not Available | - | 7109321 - 7110163 | 30927.5 |
| srpbcc family protein | AJAP_RS32675 | Not Available | - | 7110160 - 7110591 | 15135.0 |
| lipid-transfer protein | AJAP_RS32680 | Not Available | - | 7110609 - 7111802 | 42366.8 |
| hypothetical protein | AJAP_RS32685 | Not Available | + | 7111983 - 7112930 | 33211.3 |
| rraa family protein | AJAP_RS32690 | Not Available | + | 7112940 - 7113647 | 25115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.