Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | AJAP_RS02765 | Not Available | - | 545388 - 546080 | 24897.9 |
| tetr/acrr family transcriptional regulator | AJAP_RS02770 | Not Available | - | 546129 - 546725 | 21833.1 |
| mfs transporter | AJAP_RS02775 | Not Available | + | 547068 - 548567 | 52687.5 |
| sdr family oxidoreductase | AJAP_RS02780 | Not Available | + | 548604 - 550295 | 60739.8 |
| tetr/acrr family transcriptional regulator | AJAP_RS02785 | Not Available | + | 550313 - 550903 | 21383.7 |
| citrate synthase 2 | AJAP_RS02790 | Not Available | - | 550959 - 552110 | 41641.6 |
| urease subunit gamma | AJAP_RS02795 | Not Available | + | 552402 - 552704 | 10844.1 |
| urease subunit beta | AJAP_RS02800 | Not Available | + | 552717 - 553010 | 10568.7 |
| urease subunit alpha | AJAP_RS02805 | Not Available | + | 553010 - 554731 | 60273.1 |
| urease accessory protein uref | AJAP_RS02810 | Not Available | + | 554731 - 555405 | 23426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.