Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase beta superfamily protein | AJAP_RS02310 | Not Available | + | 450809 - 451324 | 19609.9 |
| transporter substrate-binding domain-containing protein | AJAP_RS02315 | Not Available | + | 451324 - 452118 | 29098.7 |
| hypothetical protein | AJAP_RS02320 | Not Available | + | 452199 - 452837 | 21745.4 |
| m23 family metallopeptidase | AJAP_RS02325 | Not Available | + | 452995 - 453903 | 31377.2 |
| o-succinylbenzoate synthase | AJAP_RS02330 | Not Available | - | 453960 - 454904 | 32675.0 |
| btad domain-containing putative transcriptional regulator | AJAP_RS02335 | Not Available | + | 454962 - 457784 | 102665.0 |
| ydcf family protein | AJAP_RS02340 | Not Available | - | 457900 - 458716 | 31175.2 |
| duf4253 domain-containing protein | AJAP_RS02345 | Not Available | - | 458769 - 459524 | 27750.0 |
| dna repair helicase xpb | AJAP_RS02350 | Not Available | - | 459969 - 461615 | 61000.6 |
| hypothetical protein | AJAP_RS02355 | Not Available | + | 461701 - 462336 | 22279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.