Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 15 protein | AJAP_RS02210 | Not Available | + | 429346 - 431514 | 77799.8 |
| peptide deformylase | AJAP_RS02215 | Not Available | - | 431604 - 432170 | 20794.3 |
| duf3263 domain-containing protein | AJAP_RS02220 | Not Available | + | 432329 - 432640 | 12021.4 |
| lytr c-terminal domain-containing protein | AJAP_RS02225 | Not Available | + | 432637 - 433269 | 21166.5 |
| aaa family atpase | AJAP_RS02230 | Not Available | - | 433323 - 435605 | 79781.5 |
| is30 family transposase | AJAP_RS02235 | Not Available | + | 435713 - 436984 | 47368.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | AJAP_RS02240 | Not Available | - | 437224 - 438195 | 35586.3 |
| phosphatidylserine decarboxylase | AJAP_RS02245 | Not Available | - | 438199 - 438927 | 25660.2 |
| glsb/yeaq/ymge family stress response membrane protein | AJAP_RS02255 | Not Available | - | 439405 - 439686 | 9917.23 |
| arsr/smtb family transcription factor | AJAP_RS02260 | Not Available | + | 439768 - 440331 | 21248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.