Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| benzoate-coa ligase family protein | AJAP_RS02005 | Not Available | + | 387870 - 389477 | 57258.5 |
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS02010 | Not Available | - | 389689 - 390141 | 16396.8 |
| ring-cleaving dioxygenase | AJAP_RS02015 | Not Available | + | 390239 - 391198 | 34709.6 |
| alpha/beta hydrolase | AJAP_RS02020 | Not Available | + | 391195 - 391800 | 21286.2 |
| dipeptidase | AJAP_RS02025 | Not Available | + | 391837 - 392985 | 41647.1 |
| lipopolysaccharide assembly lapa domain-containing protein | AJAP_RS02030 | Not Available | + | 393024 - 393380 | 12583.8 |
| arac family transcriptional regulator | AJAP_RS02035 | Not Available | - | 393368 - 394297 | 32774.1 |
| pyridoxamine 5'-phosphate oxidase family protein | AJAP_RS02040 | Not Available | + | 394380 - 394778 | 14622.5 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AJAP_RS02045 | Not Available | - | 394741 - 395601 | 31584.0 |
| abi-alpha family protein | AJAP_RS02050 | Not Available | + | 395690 - 396472 | 28401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.