Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | AJAP_RS44595 | Not Available | + | 378397 - 378576 | 6928.3 |
| 2-keto-4-pentenoate hydratase | AJAP_RS01960 | Not Available | + | 378736 - 379533 | 27627.3 |
| 2-keto-4-pentenoate hydratase | AJAP_RS01965 | Not Available | + | 379530 - 380291 | 26422.6 |
| alpha/beta fold hydrolase | AJAP_RS01970 | Not Available | - | 380272 - 381156 | 32063.8 |
| abc transporter atp-binding protein | AJAP_RS01975 | Not Available | - | 381170 - 383071 | 68344.7 |
| hypothetical protein | AJAP_RS01980 | Not Available | + | 383319 - 383750 | 15565.1 |
| cupin domain-containing protein | AJAP_RS01985 | Not Available | - | 383713 - 384189 | 17619.1 |
| tetr/acrr family transcriptional regulator | AJAP_RS01990 | Not Available | + | 384250 - 384792 | 19787.3 |
| 2,3-epoxybenzoyl-coa dihydrolase | AJAP_RS01995 | Not Available | + | 384831 - 386423 | 58660.3 |
| benzoyl-coa 2,3-epoxidase subunit boxb | AJAP_RS02000 | Not Available | + | 386431 - 387852 | 53984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.