Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| epoxide hydrolase family protein | AJAP_RS01315 | Not Available | + | 265360 - 266514 | 42099.5 |
| bacterial proteasome activator family protein | AJAP_RS01320 | Not Available | - | 266581 - 267189 | 21384.1 |
| cysteine desulfurase-like protein | AJAP_RS01325 | Not Available | + | 267325 - 268524 | 41727.3 |
| nad(p)h-quinone oxidoreductase | AJAP_RS01330 | Not Available | - | 268521 - 269498 | 33487.5 |
| m28 family metallopeptidase | AJAP_RS01335 | Not Available | + | 269579 - 271120 | 52728.8 |
| neutral zinc metallopeptidase | AJAP_RS01340 | Not Available | - | 271227 - 272144 | 31910.8 |
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS01345 | Not Available | + | 272683 - 273186 | 18963.0 |
| rna polymerase sigma factor | AJAP_RS01350 | Not Available | - | 273176 - 274309 | 40811.6 |
| ycii family protein | AJAP_RS01355 | Not Available | - | 274318 - 274725 | 14869.7 |
| ricin domain-containing protein | AJAP_RS01360 | Not Available | + | 274829 - 276553 | 60626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.