Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS27680 | Not Available | + | 5978117 - 5978371 | 9254.15 |
| Trna-asn; | Not Available | Not Available | + | 5978647 - 5978722 | Not Available |
| Trna-trp; | Not Available | Not Available | + | 5978808 - 5978878 | Not Available |
| hypothetical protein | AJAP_RS27690 | Not Available | + | 5978955 - 5979167 | 7803.89 |
| Terminase | AJAP_RS27695 | Not Available | + | 5979316 - 5980869 | 57006.6 |
| Portal protein | AJAP_RS27700 | Not Available | + | 5980869 - 5982293 | 52880.2 |
| Capsid maturation protease | AJAP_RS27705 | Not Available | + | 5982290 - 5983102 | 30024.5 |
| Scaffolding protein | AJAP_RS27710 | Not Available | + | 5983163 - 5983693 | 18499.4 |
| Major capsid protein | AJAP_RS27715 | Not Available | + | 5983731 - 5984711 | 33913.1 |
| Head-to-tail adaptor | AJAP_RS27720 | Not Available | + | 5984954 - 5985361 | 15594.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.