Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AJAP_RS10225 | Not Available | - | 2094094 - 2095356 | 44227.4 |
| hypothetical protein | AJAP_RS10230 | Not Available | - | 2095984 - 2096187 | 7337.4 |
| fatty acid desaturase family protein | AJAP_RS10235 | Not Available | - | 2096198 - 2097313 | 42069.3 |
| ferredoxin reductase | AJAP_RS10240 | Not Available | - | 2097327 - 2098418 | 39617.3 |
| tetr family transcriptional regulator | AJAP_RS10245 | Not Available | + | 2098508 - 2099164 | 24851.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | AJAP_RS10250 | Not Available | + | 2099345 - 2100451 | 38034.7 |
| nad(p) transhydrogenase subunit alpha | AJAP_RS10255 | Not Available | + | 2100451 - 2100750 | 10157.0 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | AJAP_RS10260 | Not Available | + | 2100747 - 2102132 | 47244.6 |
| lipoate--protein ligase family protein | AJAP_RS10265 | Not Available | + | 2102129 - 2102857 | 26059.0 |
| histone-like nucleoid-structuring protein lsr2 | AJAP_RS10270 | Not Available | - | 2102913 - 2103617 | 23445.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.