Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine deiminase | AJAP_RS00765 | Not Available | - | 150430 - 151641 | 43167.5 |
| cpbp family intramembrane glutamic endopeptidase | AJAP_RS00770 | Not Available | - | 151655 - 152452 | 29146.1 |
| ppox class f420-dependent oxidoreductase | AJAP_RS00775 | Not Available | + | 152476 - 152937 | 16897.1 |
| duf2470 domain-containing protein | AJAP_RS00780 | Not Available | - | 152934 - 153725 | 29069.8 |
| hypothetical protein | AJAP_RS00785 | Not Available | + | 153820 - 154827 | 34970.5 |
| hypothetical protein | AJAP_RS00790 | Not Available | - | 154830 - 155570 | 25882.8 |
| substrate-binding and vwa domain-containing protein | AJAP_RS00795 | Not Available | - | 155582 - 157399 | 63943.4 |
| homogentisate 1,2-dioxygenase | AJAP_RS00800 | Not Available | - | 157561 - 158736 | 42912.2 |
| hypothetical protein | AJAP_RS00805 | Not Available | + | 158822 - 159676 | 30063.1 |
| iclr family transcriptional regulator | AJAP_RS00810 | Not Available | + | 159673 - 160314 | 21625.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.