Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2631 domain-containing protein | AJAP_RS10025 | Not Available | - | 2048834 - 2049103 | 10144.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AJAP_RS10030 | Not Available | + | 2049199 - 2050404 | 41878.1 |
| m50 family metallopeptidase | AJAP_RS10035 | Not Available | + | 2050408 - 2051634 | 43557.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AJAP_RS10040 | Not Available | + | 2051753 - 2052904 | 40544.0 |
| gnat family n-acetyltransferase | AJAP_RS10045 | Not Available | + | 2053059 - 2053913 | 30398.4 |
| penicillin-binding transpeptidase domain-containing protein | AJAP_RS10050 | Not Available | + | 2053963 - 2055768 | 61852.6 |
| type i methionyl aminopeptidase | AJAP_RS10055 | Not Available | + | 2055792 - 2056649 | 31158.1 |
| fadr/gntr family transcriptional regulator | AJAP_RS10060 | Not Available | - | 2056728 - 2057417 | 25207.7 |
| mfs transporter | AJAP_RS10065 | Not Available | + | 2057466 - 2058713 | 42820.7 |
| hypothetical protein | AJAP_RS10070 | Not Available | + | 2058769 - 2059281 | 18013.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.