Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AJAP_RS09975 | Not Available | + | 2036357 - 2037814 | 49779.4 |
| ydcf family protein | AJAP_RS09980 | Not Available | - | 2037867 - 2039116 | 45623.3 |
| alpha/beta fold hydrolase | AJAP_RS09985 | Not Available | + | 2039165 - 2039893 | 24943.1 |
| plp-dependent aminotransferase family protein | AJAP_RS09990 | Not Available | - | 2039948 - 2041384 | 51537.8 |
| methionine synthase | AJAP_RS09995 | Not Available | - | 2041397 - 2045005 | 131212.0 |
| acyltransferase family protein | AJAP_RS10000 | Not Available | - | 2045149 - 2046237 | 39784.5 |
| hypothetical protein | AJAP_RS10005 | Not Available | + | 2046800 - 2047084 | 10096.3 |
| hypothetical protein | AJAP_RS10010 | Not Available | + | 2047081 - 2047374 | 11037.2 |
| peptidylprolyl isomerase | AJAP_RS10015 | Not Available | - | 2047417 - 2048094 | 24035.0 |
| hypothetical protein | AJAP_RS10020 | Not Available | + | 2048219 - 2048821 | 21865.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.