Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | AJAP_RS09730 | Not Available | + | 1992889 - 1993638 | 26388.4 |
| cpbp family intramembrane glutamic endopeptidase | AJAP_RS09735 | Not Available | + | 1993696 - 1994514 | 29115.2 |
| 30s ribosomal protein s16 | AJAP_RS09740 | Not Available | + | 1994710 - 1995156 | 16078.1 |
| rna-binding protein | AJAP_RS09745 | Not Available | + | 1995153 - 1995392 | 8588.37 |
| ribosome maturation factor rimm | AJAP_RS09750 | Not Available | + | 1995409 - 1995921 | 18160.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | AJAP_RS09755 | Not Available | + | 1995921 - 1996685 | 28003.3 |
| 50s ribosomal protein l19 | AJAP_RS09760 | Not Available | + | 1996846 - 1997214 | 14021.9 |
| signal peptidase i | AJAP_RS09765 | Not Available | + | 1997246 - 1998175 | 33553.2 |
| ribonuclease hii | AJAP_RS09770 | Not Available | + | 1998234 - 1999013 | 27193.7 |
| duf2469 domain-containing protein | AJAP_RS09775 | Not Available | + | 1999010 - 1999333 | 12697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.