Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [protein-pii] uridylyltransferase | AJAP_RS09680 | Not Available | + | 1980120 - 1982435 | 81963.4 |
| hypothetical protein | AJAP_RS09685 | Not Available | + | 1982522 - 1982893 | 12368.9 |
| ku protein | AJAP_RS09690 | Not Available | + | 1982944 - 1983783 | 30825.6 |
| nlpc/p60 family protein | AJAP_RS09695 | Not Available | - | 1984030 - 1985034 | 35823.2 |
| poly-gamma-glutamate biosynthesis protein pgsc/capc | AJAP_RS09700 | Not Available | - | 1985043 - 1985525 | 16828.6 |
| poly-gamma-glutamate synthase pgsb | AJAP_RS09705 | Not Available | - | 1985525 - 1986706 | 42959.3 |
| hamp domain-containing protein | AJAP_RS09710 | Not Available | - | 1986703 - 1989027 | 81825.2 |
| hypothetical protein | AJAP_RS09715 | Not Available | + | 1989239 - 1990120 | 30562.9 |
| signal recognition particle protein | AJAP_RS09720 | Not Available | + | 1990228 - 1991766 | 54492.3 |
| amidohydrolase family protein | AJAP_RS09725 | Not Available | + | 1991770 - 1992843 | 37634.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.