Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AJAP_RS09485 | Not Available | - | 1942155 - 1943651 | 51635.3 |
| tetr/acrr family transcriptional regulator | AJAP_RS09490 | Not Available | + | 1943759 - 1944490 | 26994.2 |
| iclr family transcriptional regulator | AJAP_RS09495 | Not Available | - | 1944480 - 1945256 | 27577.3 |
| malate synthase a | AJAP_RS09500 | Not Available | + | 1945360 - 1946937 | 58073.7 |
| duf6986 family protein | AJAP_RS09505 | Not Available | + | 1946942 - 1948138 | 43184.0 |
| ydcf family protein | AJAP_RS44750 | Not Available | - | 1948117 - 1948336 | 8504.31 |
| hnh endonuclease signature motif containing protein | AJAP_RS09515 | Not Available | - | 1948824 - 1950077 | 45494.6 |
| gnat family n-acetyltransferase | AJAP_RS09520 | Not Available | - | 1950226 - 1950699 | 16932.9 |
| dsba family protein | AJAP_RS09525 | Not Available | - | 1950709 - 1951314 | 21646.8 |
| marr family winged helix-turn-helix transcriptional regulator | AJAP_RS09530 | Not Available | - | 1951351 - 1951833 | 17642.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.