Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit c | AJAP_RS09440 | Not Available | + | 1928484 - 1929095 | 20735.7 |
| sensor histidine kinase kdpd | AJAP_RS09445 | Not Available | + | 1929101 - 1931686 | 92669.7 |
| response regulator | AJAP_RS09450 | Not Available | + | 1931683 - 1932384 | 25578.7 |
| hypothetical protein | AJAP_RS44055 | Not Available | - | 1932459 - 1933055 | 18352.2 |
| acylphosphatase | AJAP_RS42890 | Not Available | + | 1933259 - 1933546 | 10444.4 |
| chromosome segregation protein smc | AJAP_RS09460 | Not Available | + | 1933635 - 1937234 | 131286.0 |
| duf3455 domain-containing protein | AJAP_RS09465 | Not Available | - | 1937238 - 1937741 | 17001.3 |
| sodium:solute symporter | AJAP_RS09470 | Not Available | - | 1937832 - 1939415 | 55899.0 |
| anhydro-n-acetylmuramic acid kinase | AJAP_RS09475 | Not Available | - | 1939425 - 1940633 | 41118.4 |
| signal recognition particle-docking protein ftsy | AJAP_RS09480 | Not Available | + | 1940786 - 1942090 | 45518.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.