Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | AJAP_RS09340 | Not Available | + | 1904301 - 1905197 | 31039.7 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | AJAP_RS09345 | Not Available | - | 1905202 - 1907046 | 65433.6 |
| 5-deoxy-glucuronate isomerase | AJAP_RS09350 | Not Available | - | 1907043 - 1907933 | 32533.9 |
| 5-dehydro-2-deoxygluconokinase | AJAP_RS09355 | Not Available | - | 1907930 - 1908862 | 32585.0 |
| atp-binding cassette domain-containing protein | AJAP_RS09360 | Not Available | - | 1908859 - 1909644 | 28074.9 |
| abc transporter permease | AJAP_RS09365 | Not Available | - | 1909641 - 1910675 | 36594.3 |
| sugar abc transporter substrate-binding protein | AJAP_RS09370 | Not Available | - | 1910672 - 1911658 | 33880.2 |
| sugar phosphate isomerase/epimerase family protein | AJAP_RS09375 | Not Available | - | 1911683 - 1912582 | 32001.1 |
| laci family dna-binding transcriptional regulator | AJAP_RS09380 | Not Available | + | 1912685 - 1913689 | 35237.2 |
| gfo/idh/moca family oxidoreductase | AJAP_RS09385 | Not Available | + | 1913694 - 1914695 | 34692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.