Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | AJAP_RS09240 | Not Available | + | 1882743 - 1883147 | 14599.1 |
| iclr family transcriptional regulator c-terminal domain-containing protein | AJAP_RS09245 | Not Available | + | 1883157 - 1883963 | 29148.7 |
| ntp transferase domain-containing protein | AJAP_RS09250 | Not Available | + | 1883956 - 1884525 | 19622.4 |
| aaa family atpase | AJAP_RS09255 | Not Available | + | 1884558 - 1885430 | 31725.3 |
| aldo/keto reductase | AJAP_RS09260 | Not Available | - | 1885434 - 1886453 | 37030.0 |
| tetr/acrr family transcriptional regulator | AJAP_RS09265 | Not Available | + | 1886550 - 1887116 | 20330.4 |
| fad-dependent oxidoreductase | AJAP_RS09270 | Not Available | + | 1887174 - 1888391 | 44575.1 |
| vwa domain-containing protein | AJAP_RS09275 | Not Available | + | 1888399 - 1889499 | 40179.3 |
| xdhc family protein | AJAP_RS09280 | Not Available | + | 1889492 - 1890604 | 39371.8 |
| lrp/asnc family transcriptional regulator | AJAP_RS09285 | Not Available | - | 1890582 - 1891061 | 17523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.