Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | AJAP_RS09190 | Not Available | - | 1874276 - 1874959 | 25162.7 |
| acetoacetate decarboxylase family protein | AJAP_RS09195 | Not Available | - | 1874956 - 1875873 | 33521.9 |
| tetr/acrr family transcriptional regulator | AJAP_RS09200 | Not Available | - | 1875946 - 1876482 | 19261.9 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | AJAP_RS09205 | Not Available | + | 1876584 - 1877843 | 44800.9 |
| coa transferase subunit a | AJAP_RS09210 | Not Available | + | 1877912 - 1878721 | 28967.6 |
| coa-transferase subunit beta | AJAP_RS09215 | Not Available | + | 1878718 - 1879473 | 26415.6 |
| thiolase family protein | AJAP_RS09220 | Not Available | + | 1879470 - 1880648 | 40894.6 |
| protocatechuate 3,4-dioxygenase subunit beta | AJAP_RS09225 | Not Available | + | 1880677 - 1881411 | 27612.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | AJAP_RS09230 | Not Available | + | 1881411 - 1881959 | 19512.7 |
| 3-oxoadipate enol-lactonase | AJAP_RS09235 | Not Available | + | 1881952 - 1882746 | 27816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.