Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family multidrug efflux mfs transporter | AJAP_RS09095 | Not Available | - | 1857338 - 1858597 | 43020.0 |
| fumarylacetoacetate hydrolase family protein | AJAP_RS09100 | Not Available | + | 1858828 - 1859688 | 30869.3 |
| enolase c-terminal domain-like protein | AJAP_RS09105 | Not Available | + | 1859688 - 1860989 | 46844.6 |
| sdr family nad(p)-dependent oxidoreductase | AJAP_RS09110 | Not Available | + | 1860986 - 1861747 | 25982.0 |
| sugar abc transporter substrate-binding protein | AJAP_RS09115 | Not Available | + | 1861773 - 1862810 | 35929.1 |
| sugar abc transporter atp-binding protein | AJAP_RS09120 | Not Available | + | 1862807 - 1864327 | 53554.9 |
| abc transporter permease | AJAP_RS09125 | Not Available | + | 1864324 - 1865340 | 34778.6 |
| fadr/gntr family transcriptional regulator | AJAP_RS09130 | Not Available | - | 1865451 - 1866161 | 25541.5 |
| l-rhamnose mutarotase | AJAP_RS09135 | Not Available | + | 1866268 - 1866570 | 11393.5 |
| aldo/keto reductase | AJAP_RS09140 | Not Available | + | 1866567 - 1867538 | 35233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.