Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulp family inorganic anion transporter | AJAP_RS09045 | Not Available | - | 1844046 - 1845716 | 56933.5 |
| arsr/smtb family transcription factor | AJAP_RS09050 | Not Available | - | 1845721 - 1846050 | 12005.8 |
| transglycosylase domain-containing protein | AJAP_RS09055 | Not Available | + | 1846151 - 1848091 | 69954.7 |
| o-methyltransferase | AJAP_RS09060 | Not Available | - | 1848634 - 1849290 | 22886.5 |
| abc transporter atp-binding protein | AJAP_RS09065 | Not Available | - | 1849323 - 1850150 | 29981.3 |
| plp-dependent aminotransferase family protein | AJAP_RS09070 | Not Available | + | 1850279 - 1851595 | 46722.1 |
| hypothetical protein | AJAP_RS09075 | Not Available | - | 1851668 - 1853476 | 64756.6 |
| sdr family oxidoreductase | AJAP_RS09080 | Not Available | - | 1853590 - 1855563 | 70038.3 |
| hypothetical protein | AJAP_RS09085 | Not Available | - | 1855622 - 1855840 | 7744.28 |
| nad(p)/fad-dependent oxidoreductase | AJAP_RS09090 | Not Available | + | 1856037 - 1857260 | 43237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.