Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | AJAP_RS08995 | Not Available | + | 1831664 - 1832377 | 25011.7 |
| aldehyde dehydrogenase | AJAP_RS09000 | Not Available | + | 1832374 - 1833738 | 48126.1 |
| 3-oxoacyl-acp reductase | AJAP_RS09005 | Not Available | + | 1833741 - 1834508 | 26547.7 |
| aminomethyl-transferring glycine dehydrogenase | AJAP_RS09010 | Not Available | + | 1835277 - 1838108 | 100047.0 |
| glycine cleavage system aminomethyltransferase gcvt | AJAP_RS09015 | Not Available | + | 1838117 - 1839208 | 38544.0 |
| glycine cleavage system protein gcvh | AJAP_RS09020 | Not Available | + | 1839226 - 1839603 | 13343.5 |
| serine hydroxymethyltransferase | AJAP_RS09025 | Not Available | + | 1839605 - 1840873 | 45272.1 |
| lipoyl synthase | AJAP_RS09030 | Not Available | + | 1840870 - 1841871 | 36821.1 |
| l-serine ammonia-lyase | AJAP_RS09035 | Not Available | + | 1841888 - 1843261 | 48497.9 |
| fadr/gntr family transcriptional regulator | AJAP_RS09040 | Not Available | + | 1843350 - 1844072 | 25632.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.