Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease domain-containing protein | AJAP_RS08890 | Not Available | + | 1815707 - 1816399 | 24272.6 |
| sige family rna polymerase sigma factor | AJAP_RS08895 | Not Available | + | 1816467 - 1816982 | 19216.1 |
| hypothetical protein | AJAP_RS08900 | Not Available | + | 1816982 - 1817737 | 26056.0 |
| diviva domain-containing protein | AJAP_RS08905 | Not Available | + | 1817857 - 1818582 | 26480.5 |
| duf177 domain-containing protein | AJAP_RS08915 | Not Available | + | 1819136 - 1819753 | 22069.7 |
| 50s ribosomal protein l32 | AJAP_RS08920 | Not Available | + | 1819826 - 1820008 | 6678.21 |
| ribonuclease iii | AJAP_RS08925 | Not Available | + | 1820024 - 1820770 | 26260.2 |
| polysaccharide lyase 6 family protein | AJAP_RS08930 | Not Available | + | 1820882 - 1822240 | 47583.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | AJAP_RS08935 | Not Available | + | 1822283 - 1823143 | 31848.2 |
| helix-turn-helix domain-containing protein | AJAP_RS08940 | Not Available | + | 1823211 - 1823651 | 16157.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.