Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | AJAP_RS08840 | Not Available | - | 1801353 - 1802342 | 35506.1 |
| mce family protein | AJAP_RS08845 | Not Available | - | 1802339 - 1803346 | 35639.0 |
| mce family protein | AJAP_RS08850 | Not Available | - | 1803343 - 1804608 | 44398.5 |
| abc transporter permease | AJAP_RS08855 | Not Available | - | 1804605 - 1805456 | 30062.0 |
| mlae family abc transporter permease | AJAP_RS08860 | Not Available | - | 1805456 - 1806250 | 27488.2 |
| llm class flavin-dependent oxidoreductase | AJAP_RS08865 | Not Available | - | 1807049 - 1808044 | 35414.1 |
| helix-turn-helix domain-containing protein | AJAP_RS08870 | Not Available | + | 1808230 - 1812024 | 135686.0 |
| held family protein | AJAP_RS08875 | Not Available | - | 1812281 - 1814395 | 77995.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | AJAP_RS08880 | Not Available | + | 1814518 - 1815072 | 19296.0 |
| pantetheine-phosphate adenylyltransferase | AJAP_RS08885 | Not Available | + | 1815125 - 1815607 | 17852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.