Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc ligand binding domain-containing protein | AJAP_RS08690 | Not Available | - | 1770245 - 1770478 | 7977.64 |
| thiamine-phosphate kinase | AJAP_RS08695 | Not Available | + | 1770612 - 1771568 | 32761.6 |
| gnat family n-acetyltransferase | AJAP_RS08700 | Not Available | - | 1771565 - 1772311 | 26806.1 |
| gnat family n-acetyltransferase | AJAP_RS08705 | Not Available | + | 1772369 - 1772839 | 16965.2 |
| gamma carbonic anhydrase family protein | AJAP_RS08710 | Not Available | + | 1772848 - 1773378 | 18700.4 |
| uracil-dna glycosylase | AJAP_RS08715 | Not Available | + | 1773390 - 1774067 | 24312.2 |
| 50s ribosomal protein l28 | AJAP_RS08720 | Not Available | - | 1774632 - 1774823 | 6845.39 |
| dak2 domain-containing protein | AJAP_RS08725 | Not Available | + | 1774957 - 1776540 | 53172.5 |
| atp-dependent dna helicase recg | AJAP_RS08730 | Not Available | + | 1776545 - 1778698 | 78027.2 |
| hypothetical protein | AJAP_RS08735 | Not Available | + | 1778782 - 1779162 | 13357.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.