Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AJAP_RS08640 | Not Available | - | 1761120 - 1761500 | 13835.3 |
| fad:protein fmn transferase | AJAP_RS08645 | Not Available | - | 1761543 - 1762280 | 25955.8 |
| fmn-binding protein | AJAP_RS08650 | Not Available | - | 1762277 - 1762696 | 14205.6 |
| ferric reductase-like transmembrane domain-containing protein | AJAP_RS08655 | Not Available | - | 1762714 - 1764051 | 48417.5 |
| response regulator transcription factor | AJAP_RS08660 | Not Available | + | 1764197 - 1764892 | 25372.5 |
| cell wall metabolism sensor histidine kinase walk | AJAP_RS08665 | Not Available | + | 1764889 - 1766325 | 51509.0 |
| pyridoxamine 5'-phosphate oxidase family protein | AJAP_RS08670 | Not Available | - | 1766583 - 1767236 | 23535.9 |
| plp-dependent aminotransferase family protein | AJAP_RS08675 | Not Available | + | 1767318 - 1768676 | 47288.6 |
| zinc-binding dehydrogenase | AJAP_RS08680 | Not Available | + | 1768710 - 1769678 | 33193.4 |
| duf3515 domain-containing protein | AJAP_RS08685 | Not Available | - | 1769683 - 1770225 | 18389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.