Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | AJAP_RS08590 | Not Available | + | 1750258 - 1750860 | 22262.1 |
| hu family dna-binding protein | AJAP_RS08595 | Not Available | + | 1751114 - 1751779 | 22610.3 |
| nudix hydrolase | AJAP_RS08600 | Not Available | - | 1752403 - 1753338 | 33487.6 |
| rna degradosome polyphosphate kinase | AJAP_RS08605 | Not Available | - | 1753335 - 1755638 | 85265.5 |
| 2-phospho-l-lactate guanylyltransferase | AJAP_RS08610 | Not Available | - | 1755697 - 1756302 | 20443.5 |
| lysophospholipid acyltransferase family protein | AJAP_RS08615 | Not Available | + | 1756393 - 1757136 | 27241.8 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | AJAP_RS08620 | Not Available | + | 1757136 - 1758149 | 35150.2 |
| cysteine dioxygenase | AJAP_RS08625 | Not Available | + | 1758409 - 1758888 | 17945.2 |
| asparaginase | AJAP_RS08630 | Not Available | - | 1758935 - 1759948 | 34891.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AJAP_RS08635 | Not Available | - | 1760299 - 1761123 | 30199.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.